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IC&WMexico2016. Practical Course on Next-Generation Sequencing (NGS)


  • Practical Course on Next-Generation Sequencing (NGS)
  • Instructors: Dr. Ana Conesa (DEANN Project) & Dr. Erik Bongcam (EMBnet)
  • 2 day Practical Course taking place on April, 22 and 23, 2016.

Note: Prices in USD


  • $0.00


Practical Course  on Next-Generation Sequencing (NGS)

Instructors: Dr. Ana Conesa (DEANN Project) & Dr. Erik Bongcam (EMBnet)

Practical Course Details:

This is a 2 day workshop taking place on April, 22 and 23.

Program NGS Course SolBio Conference Cancun 22nd 23rd April 2016

Students should bring their laptops. The eBiokit device will be used to provide local access to databases and programs.

22nd April. Genome Analysis of NGS data

9:00-10:00 Introduction to Genome Analysis using NGS data. (Erik Bongcam)

10:00-11:00 Practical 1: Basic NGS read data handling and quality control

11:00-11:30 Break

11:30-13:00 Practical 2: Whole genome de-novo assembly

13:00-14:00 Lunch

14:00-15:30 Practical 3: Mapping NGS reads to a reference sequence

15:30-16:00 Break

16:00-17:00 Population Genomics. (Andres Moreno)

17:00-18: Practical 4: Population Structure Analysis of Admixed Genomes

23rd April. Transcriptomics Analysis with NGS Data

9:00-10:00 Introduction to RNAseq data analysis. (Ana Conesa)

10:00-11:00 Practical 5: RNAseq mapping and quantification

11:00-11:30 Break

11:30-13:00 Practical 6: Differential expression analysis and enrichment

13:00-14:00 Lunch

14:00-15:30 Systems Biology and regulatory networks (Claudia Rangel)

15:30-16:00 Break

16:00-18:00 Hand-ons on network analysis